TFb2

Description

InterPro: This domain represents the p52/Tfb2 subunit in the TFIIH complex, which is not only required for transcription but also plays a central role in DNA repair.

References:


Lang, D; Weiche, B; Timmerhaus, G; Richardt, S; Riano-Pachon, DM; Correa, LG; Reski, R; Mueller-Roeber, B; Rensing, SA. 2010. Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol. 2: 488-503 PubMed


Summary

Name: TFb2
Class: TR
Number of species containing the TAP: 114
Number of available proteins: 179

The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules:


(Domain names are clickable)


Phylogenetic tree for Archeaplastida:

To view the tree click here.



TAP distribution:

The following table shows the distribution of TFb2 over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.

Minimum Maximum Average Median Standard deviation
0201.512.06

List of species containing TFb2 sorted by kingdomcladesupergrouporderfamily:

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expand kingdom Archaeplastida (185 proteins in 114 species)
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A list of species letter codes included in the protein names can be found here (opens in new tab).


Impressum