Whirly
Description
| Desveaux et al. (2002): | The single-stranded DNA (ssDNA) binding subunit of the plant transcription factor p24 is representative of a novel family of ubiquitous plant-specific proteins that we refer to as the Whirly family because of their quaternary structure. |
References:
| 1) | Lang, D; Weiche, B; Timmerhaus, G; Richardt, S; Riano-Pachon, DM; Correa, LG; Reski, R; Mueller-Roeber, B; Rensing, SA. 2010. Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol. 2: 488-503 PubMed |
| 2) | Desveaux, D; Allard, J; Brisson, N; Sygusch, J. 2002. A new family of plant transcription factors displays a novel ssDNA-binding surface. Nat Struct Biol. 9(7):512-7 PubMed |
Summary
| Name: | Whirly |
|---|---|
| Class: | TF |
| Number of species containing the TAP: | 112 |
| Number of available proteins: | 239 |
The colour code corresponds to the rules for the domains:
should be contained
should not be contained
should not be contained
Domain rules:
(Domain names are clickable)
Phylogenetic tree for Archeaplastida:
No tree was calculated yet.
TAP distribution:
The following table shows the distribution of Whirly over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.
| Minimum | Maximum | Average | Median | Standard deviation |
|---|---|---|---|---|
| 0 | 9 | 1.96 | 2 | 1.44 |