C2C2_YABBY

Description

Bowman (2000): The establishment of abaxial-adaxial polarity in lateral organs involves factors intrinsic to the primordia and interactions with the apical meristem from which they are derived. Recently, a small plant-specific family of genes, the YABBY gene family, has been proposed to specify abaxial cell fate. Each asymmetric above-ground lateral organ expresses at least one member of the family in a polar manner, and loss- and gain-of-function studies indicate that they are sufficient to specify abaxial cell fate and that they act in both distinct and redundant manners.

References:


1) Bowman, JL. 2000. The YABBY gene family and abaxial cell fate. Curr. Opin. Plant Biol. 3(1):17-22 PubMed
2) Golz, JF; Hudson, A. 1999. Plant development: YABBYs claw to the fore. Curr. Biol. 9(22):R861-3 PubMed


Summary

Name: C2C2_YABBY
Class: TF
Number of species containing the TAP: 96
Number of available proteins: 717

The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules:


(Domain names are clickable)


Phylogenetic tree for Archeaplastida:

To view the tree click here.



TAP distribution:

The following table shows the distribution of C2C2_YABBY over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.

Minimum Maximum Average Median Standard deviation
0255.8365.05

List of species containing C2C2_YABBY sorted by kingdomcladesupergrouporderfamily:

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expand kingdom Archaeplastida (717 proteins in 96 species)
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A list of species letter codes included in the protein names can be found here (opens in new tab).


Impressum