DDT

Description

Doerks et al. (2001): Homology-based sequence analyses have revealed the presence of a novel domain (DDT) in bromodomain PHD finger transcription factors (BPTFs), chromatin remodeling factors of the BAZ-family and other putative nuclear proteins. This domain is characterized by a number of conserved aromatic and charged residues and is predicted to consist of three alpha helices. Recent studies indicate a likely DNA-binding function for the DDT domain.

References:


Doerks, T; Copley, R; Bork, P. 2001. DDT -- a novel domain in different transcription and chromosome remodeling factors. Trends Biochem. Sci. 26(3):145-6 PubMed


Summary

Name: DDT
Class: TR
Number of species containing the TAP: 105
Number of available proteins: 666

The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules:


(Domain names are clickable)


Phylogenetic tree for Archeaplastida:

To view the tree click here.



TAP distribution:

The following table shows the distribution of DDT over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.

Minimum Maximum Average Median Standard deviation
0365.6854.52

List of species containing DDT sorted by kingdomcladesupergrouporderfamily:

hide all | show all

expand kingdom Archaeplastida (676 proteins in 105 species)