PcG_VEFS

References:


1) Lang, D; Weiche, B; Timmerhaus, G; Richardt, S; Riano-Pachon, DM; Correa, LG; Reski, R; Mueller-Roeber, B; Rensing, SA. 2010. Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol. 2: 488-503 PubMed
2) Pu, L; Sung, ZR. 2015. PcG and trxG in plants - friends or foes. Trends Genet. 31(5):252-62 PubMed


Summary

Name: PcG_VEFS
Class: TR
Number of species containing the TAP: 110
Number of available proteins: 249

The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules:


(Domain names are clickable)


Phylogenetic tree for Archeaplastida:

To view the tree click here.



TAP distribution:

The following table shows the distribution of PcG_VEFS over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.

Minimum Maximum Average Median Standard deviation
0102.1121.78

List of species containing PcG_VEFS sorted by kingdomcladesupergrouporderfamily:

hide all | show all

expand kingdom Archaeplastida (259 proteins in 110 species)
select all | unselect | select genome only

A list of species letter codes included in the protein names can be found here (opens in new tab).


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