RRN3

Description

Yamamoto et al. (1996): RRN3 is one of the RRN genes specifically required for the transcription of rDNA by RNA polymerase I (Pol I) in Saccharomyces cerevisiae.

References:


1) Lang, D; Weiche, B; Timmerhaus, G; Richardt, S; Riano-Pachon, DM; Correa, LG; Reski, R; Mueller-Roeber, B; Rensing, SA. 2010. Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol. 2: 488-503 PubMed
2) Yamamoto, RT; Nogi, Y; Dodd, JA; Nomura M. 1996. RRN3 gene of Saccharomyces cerevisiae encodes an essential RNA polymerase I transcription factor which interacts with the polymerase independently of DNA template. EMBO J. 15(15):3964-73 PubMed


Summary

Name: RRN3
Class: TR
Number of species containing the TAP: 110
Number of available proteins: 179

The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules:


(Domain names are clickable)


Phylogenetic tree for Archeaplastida:

To view the tree click here.



TAP distribution:

The following table shows the distribution of RRN3 over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.

Minimum Maximum Average Median Standard deviation
081.5211.29

List of species containing RRN3 sorted by kingdomcladesupergrouporderfamily:

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expand kingdom Archaeplastida (187 proteins in 110 species)
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A list of species letter codes included in the protein names can be found here (opens in new tab).


Impressum