Species lettercodes

Protein names (e.g. in download and phylogenetic trees) are extended by a (typically five) letter code abbreviating the species, e.g. ORYSA = ORYza SAtiva. Please see the table below for the alphabetically sorted codes.



Lettercode Species Dataset
ACTCH Actinidia chinensis Genome
AEGTA Aegilops tauschii Genome
AETARV25 Aethionema arabicum Genome
AMAHYnew Amaranthus hypochondriacus Genome
AMBTR Amborella trichopoda Genome
ARAALwo Arabis alpina Genome
ARALY Arabidopsis lyrata Genome
ARATH Arabidopsis thaliana Genome
AZAIN Azadirachta indica Genome
AZOFI Azolla filiculoides Genome
BATPR Bathycoccus prasinos Genome
BETVUREFBEETnew Beta vulgaris Genome
BOESTnew Boechera stricta Genome
BRADIwonew Brachypodium distachyon Genome
BRAOL Brassica oleracea Genome
BRARA Brassica rapa Genome
CAJCA Cajanus cajan Genome
CALTU Calliarthron tuberculosum Genome
CAMSA Camelina sativa Genome
CANSA Cannabis sativa Genome
CAPANcvGLABRIUSCULUM Capsicum annuum (spp. glabriusculum) Genome
CAPANcvZUNLA Capsicum annuum (spp. zunla) Genome
CAPGRnew Capsella grandiflora Genome
CAPRUnew Capsella rubella Genome
CARPA Carica papaya Genome
CERPUGG1tr_m240lflr Ceratodon purpureus Transcriptome
CHABR Chara braunii Genome
CHAGLtr_m240lflr Chaetosphaeridium globosum Transcriptome
CHLATtr_m240lflr Chlorokybus atmophyticus Transcriptome
CHLRE Chlamydomonas reinhardtii Genome
CHLSP Chlorella sp. NC64A Genome
CHLVU Chlorella vulgaris Genome
CHOCR Chondrus crispus Genome
CICARnew Cicer arietinum Genome
CITCL Citrus clementina Genome
CITLA Citrullus lanatus Genome
CITSI Citrus sinensis Genome
COCSP Coccomyxa subellipsoidea C-169 Genome
COFCA Coffea canephora Genome
COLORtr_m240lflr Coleochaete orbicularis Transcriptome
COLSPtr_m240lflr Coleochaete sp. Transcriptome
CUCME Cucumis melo Genome
CUCSA Cucumis sativus Genome
CYAME Cyanidioschyzon merolae Genome
CYAPA Cyanophora paradoxa Genome
ELAGU Elaeis guineensis Genome
ERATE Eragrostis tef Genome
EUCGRnew Eucalyptus grandis Genome
EUTSA Eutrema salsugineum Genome
FRAVE Fragaria vesca Genome
FUNHY15tr_m240lflr Funaria hygrometrica Transcriptome
GALSU Galdieria sulphuraria Genome
GINBI Ginkgo biloba Genome
GLYMA Glycine max Genome
GONPE Gonium pectorale Genome
GOSRA Gossypium raimondii Genome
HORVUHC Hordeum vulgare Genome
JATCU Jatropha curcas Genome
KLEFLv1.1 Klebsormidium flaccidum Genome
LEAALwo Leavenworthia alabamica Genome
LINUS Linum usitatissimum Genome
LOTJA Lotus japonicus Genome
MALDO Malus domestica Genome
MANESnew Manihot esculenta Genome
MARPOtr_m240lflr Marchantia polymorpha Transcriptome
MARPOv3.1 Marchantia polymorpha Genome
MEDTR Medicago truncatula Genome
MICPUCCMP Micromonas pusilla CCMP1545 Genome
MICPURCC299 Micromonas sp. RCC299 Genome
MIMGU Mimulus guttatus Genome
MUSACnew Musa acuminata Genome
MUSBA Musa balbisiana Genome
NELNU Nelumbo nucifera Genome
NICBE Nicotiana benthamiana Genome
NITHYtr_m240lflr Nitella hyalina Transcriptome
ORYSAINDI Oryza sativa (spp. indica) Genome
ORYSAJAPON Oryza sativa (spp. japonica) Genome
OSTLU Ostreococcus lucimarinus Genome
OSTTA Ostreococcus tauri Genome
OSTTARCC809 Ostreococcus sp. RCC809 Genome
PENMAtr_m240lflr Penium margaritaceum Transcriptome
PHAEQ Phalaenopsis equestris Genome
PHAVU Phaseolus vulgaris Genome
PHODA Phoenix dactylifera Genome
PHYHEnew Phyllostachys heterocycla Genome
PHYPA33 Physcomitrella patens Genome
PICABHC Picea abies Genome
PICGLtr_m240lflr Picea glauca Transcriptome
PINTA Pinus taeda Genome
POPTR Populus trichocarpa Genome
PORCRtr_m240lflr Porphyridium cruentum Transcriptome
PORUM Porphyra umbilicalis Genome
PRUMU Prunus mume Genome
PRUPE Prunus persica Genome
PTEAQtr_m240lflr Pteridium aquilinum Transcriptome
PYRBR Pyrus bretschneideri Genome
PYRCO Pyrus communis Genome
PYRYE Pyropia yezoensis Genome
RAPRA Raphanus raphanistrum Genome
RAPSA Raphanus sativus Genome
RICCO Ricinus communis Genome
SALCU Salvinia cucullata Genome
SELMO Selaginella moellendorffii Genome
SETITnew Setaria italica Genome
SISIRwo Sisymbrium irio Genome
SOLLYnew Solanum lycopersicum Genome
SOLME Solanum melongena Genome
SOLPE Solanum pennellii Genome
SOLTUnew Solanum tuberosum Genome
SORBI Sorghum bicolor Genome
SPIPO Spirodela polyrhiza Genome
SPIPRtr_m240lflr Spirogyra pratensis Transcriptome
SPISP Spirogyra sp. Genome
TARHA Tarenaya hassleriana Genome
THECA Theobroma cacao Genome
THEPA Thellungiella parvula Genome
TRIAE Triticum aestivum Genome
TRIUR Triticum urartu Genome
UTRGI Utricularia gibba Genome
VITVI Vitis vinifera Genome
VOLCAnew Volvox carteri Genome
ZEAMA Zea mays Genome
ZOSMAnew Zostera marina Genome
Impressum